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It also provides an interactive graphical user interface to construct and execute a QSM processing pipeline, simplifying the workflow in QSM research. SEPIA connects various QSM toolboxes freely available in the field to offer greater flexibility in QSM processing. In this paper, we present an open-source processing pipeline tool called SuscEptibility mapping PIpeline tool for phAse images (SEPIA) dedicated to the post-processing of MRI phase images and QSM. However, it is challenging to obtain high quality susceptibility map because of its ill-posed nature, especially for researchers who have less experience with QSM and the optimisation of its pipeline. These properties have contributed to a growing interest to use QSM not only in research but also in clinical applications. More than 75 different pipeline-specific programs and calculations are integrated into one easy-to-use package. It has all the functional engineering modules you need to quickly solve your day-to-day pipeline design, analysis, integrity and maintenance problems.
#Pipeline toolbox software software#
Furthermore, it has a unique ability to distinguish paramagnetic and diamagnetic contributions such as haemorrhage and calcification based on image contrast. The Pipeline Toolbox is a software suite that works on all Windows based platforms.
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Quantitative susceptibility mapping (QSM) is a physics-driven computational technique that has a high sensitivity in quantifying iron deposition based on MRI phase images.